Ribosome Profiling Workshop featuring Dr. Florencia Caro

Workshop Resources

Ribosome Profiling Presentation Slide Deck

Ingolia, N. T., Ghaemmaghami, S., Newman, J. R. S. & Weissman, J. S. Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling. Science 324, 218–223 (2009).

Caro, F., Ahyong, V., Betegon, M. & DeRisi, J. L. Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages. eLife 3, e04106 (2014).

Li, G.-W., Burkhardt, D., Gross, C. & Weissman, J. S. Quantifying Absolute Protein Synthesis Rates Reveals Principles Underlying Allocation of Cellular Resources. Cell 157, 624–635 (2014).

Brar, G. A. & Weissman, J. S. Ribosome profiling reveals the what, when, where and how of protein synthesis. Nat Rev Mol Cell Biol 16, 651–664 (2015).

Ingolia, N. T., Hussmann, J. A. & Weissman, J. S. Ribosome Profiling: Global Views of Translation. Cold Spring Harb Perspect Biol 11, a032698 (2019).

Ingolia, N. T. Ribosome profiling: new views of translation, from single codons to genome scale. Nat Rev Genet 15, 205–213 (2014).

Oh, E. et al. Selective Ribosome Profiling Reveals the Cotranslational Chaperone Action of Trigger Factor In Vivo. Cell 147, 1295–1308 (2011).

Ingolia, N. T., Brar, G. A., Rouskin, S., McGeachy, A. M. & Weissman, J. S. The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments. Nat Protoc 7, 1534–1550 (2012).

McGlincy, N. J. & Ingolia, N. T. Transcriptome-wide measurement of translation by ribosome profiling. Methods 126, 112–129 (2017).